We propose a neural network model for contextual regression in which the regression model depends on contextual features that determine the active submodel and an algorithm to fit the model. The proposed simple contextual neural network (SCtxtNN) separates context identification from context-specific regression, resulting in a structured and interpretable architecture with fewer parameters than a fully connected feed-forward network. We show mathematically that the proposed architecture is sufficient to represent contextual linear regression models using only standard neural network components. Numerical experiments are provided to support the theoretical result, showing that the proposed model achieves lower excess mean squared error and more stable performance than feed-forward neural networks with comparable numbers of parameters, while larger networks improve accuracy only at the cost of increased complexity. The results suggest that incorporating contextual structure can improve model efficiency while preserving interpretability.

Deep networks are increasingly used as models of cortical computation, particularly of the visual pathway.

Spiking neural networks have attracted increasing attention in recent years due to their potential of handling time-dependent data.

Techniques for feedforward networks (FFNs) and convolutional networks (CNNs) are frequently reused across families, but the relationship between the underlying model classes is rarely made explicit. We introduce a unified node-level formalization with tensor-valued activations and show that generalized feedforward networks form a strict subset of generalized convolutional networks. Motivated by the mismatch in per-input parameterization between the two families, we propose model projection, a parameter-efficient transfer learning method for CNNs that freezes pretrained per-input-channel filters and learns a single scalar gate for each (output channel, input channel) contribution. Projection keeps all convolutional layers adaptable to downstream tasks while substantially reducing the number of trained parameters in convolutional layers. We prove that projected nodes take the generalized FFN form, enabling projected CNNs to inherit feedforward techniques that do not rely on homogeneous layer inputs. Experiments across multiple ImageNet-pretrained backbones and several downstream image classification datasets show that model projection is a strong transfer learning baseline under simple training recipes.

It is common to assess a model's merit for scientific discovery, and thus novel insights, by how well it aligns with already available domain knowledge - a dimension that is currently largely disregarded in the comparison of neural network models. While pruning can simplify deep neural network architectures and excels in identifying sparse models, as we show in the context of gene regulatory network inference, state-of-the-art techniques struggle with biologically meaningful structure learning. To address this issue, we propose DASH, a generalizable framework that guides network pruning by using domain-specific structural information in model fitting and leads to sparser, better interpretable models that are more robust to noise. Using both synthetic data with ground truth information, as well as real-world gene expression data, we show that DASH, using knowledge about gene interaction partners within the putative regulatory network, outperforms general pruning methods by a large margin and yields deeper insights into the biological systems being studied.

Grid cells in the medial entorhinal cortex create remarkable periodic maps of explored space during navigation. Recent studies show that they form similar maps of abstract cognitive spaces. Examples of such abstract environments include auditory tone sequences in which the pitch is continuously varied or images in which abstract features are continuously deformed (e.g., a cartoon bird whose legs stretch and shrink).